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Antibiotics in pregnancy: what's the link to baby's eczema?

Antibiotics

An infection during pregnancy needs treating. But could the antibiotic that clears it leave a faint trace on your baby's skin? A new analysis of over 4 million children found a small but consistent link with eczema.

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Antibiotics in pregnancy: what's the link to baby's eczema?

About this article

Author

Dr Amine Zorgani
Created 02 November 2026
Updated 05 November 2026

Atopic dermatitis, the most common form of eczema, affects about one child in five. Skin turns red, dry and itchy because a weakened barrier lets water escape and irritants in. It usually appears before the age of two and often fades by itself, but it can be the first step toward other allergies, such as food allergy, asthma and hay fever. Strictly speaking, "eczema" is the wider term, though most people use the two interchangeably. In children, this can be an early stage of what doctors call the "atopic march".

Atopic dermatitis vs eczema

Atopic dermatitis is a chronic, itchy skin condition linked to a weakened skin barrier. Eczema is the broader word, and the two are often used for the same thing.

The first 1,000 days

From conception to a child's second birthday, a window when the microbiota and immune system are being built. What happens here can echo for years. 

A small link, found again and again

Nearly one pregnancy in four involves antibiotics, according to an earlier review of about 34 million pregnancies. Researchers1 from Hungary and Indonesia combined 30 studies on prenatal antibiotics exposure and more than 4.1 million mothers and 4.3 million children. After adjusting for factors such as the mother's age, allergies and smoking, children exposed before birth had 22% to 32% higher odds of eczema, depending on how the data were corrected for publication bias. This association concerns the odds of eczema, not a precise prediction of an individual child's risk. The link grew slightly with each additional course of antibiotics, and even a single course was associated with a small increase.

In three studies, the association grew with repeated antibiotic exposure, although the authors caution that the evidence is limited. This is an association, not proof of cause, and the authors rate the evidence as low certainty. The studies also lacked comparable data to distinguish exposure in the first trimester, second trimester or third trimester, so no firm conclusion can be drawn about the timing of prenatal treatment. It was clearest in European studies, and not seen in the US ones. The association was also not statistically significant in analyses restricted to larger studies or to eczema diagnosed from medical records. For one child the increase is small, the authors say, but with so many pregnancies and so many children affected, it may still matter across a population.

Prenatal vs intrapartum antibiotics

Prenatal means taken during pregnancy. Intrapartum means given during labour and delivery. This study found a small link with the first, and none with the second. 

Why would a medicine reach the skin?

The leading hypothesis involves the microbiota. Antibiotics can disturb the microbes of a mother's gut and vagina, and a baby inherits its first microbes from her at birth. This early microbial exposure may help shape the child's developing immunity, making maternal microbiota a possible link between pregnancy and later skin health. Think of them as the first teachers of a young immune system: if the early lessons change, so might what it learns. The studies did not measure this directly. Nor could the researchers separate the effects of different antibiotic types, doses or treatment durations. Antibiotics given during labour showed no significant link, though only four studies looked. That finding does not rule out a birth-related association: the evidence for antibiotics around delivery was rated very low certainty.

6 essential things you should know about antibiotics

Learn more

None of this is a reason to refuse a treatment your doctor prescribes, since antibiotics remain essential for maternal infections. The authors recommend using antibiotic treatment in pregnancy when clearly needed, with an appropriate duration and choice of medicine. Eczema also has other roots, such as family history and variants of the filaggrin gene, which help the skin build its protective layer.

Maternal microbiota

The community of microbes living in a mother's gut and vagina. The vaginal microbiota in particular helps shape the newborn's gut microbiota, which is why antibiotics taken in pregnancy are being studied.

Source

1. Petrás S, Vargané Szabó B, Kiss T, Bahar MA, Csupor D, Tóth B. Prenatal maternal antibiotic use increases the risk of childhood eczema: a systematic review and meta-analysis. Sci Rep. 2026;16:21156. doi:10.1038/s41598-026-51441-x

Tags
Antibiotics Eczema Pregnancy Allergies Immunity Gynecology Pediatrics Dysbiosis Gut microbiota Vaginal microbiota Maternal microbiota Childbirth Microbiome Flora

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    A new dawn of antibiotics: lolamicin's breakthrough against infection and gut microbiota protection
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